Unknown

Dataset Information

0

Differential alternative splicing coupled to nonsense-mediated decay of mRNA ensures dietary restriction-induced longevity.


ABSTRACT: Alternative splicing (AS) coupled to nonsense-mediated decay (AS-NMD) is a conserved mechanism for post-transcriptional gene regulation. Here we show that, during dietary restriction (DR), AS is enhanced in Caenorhabditis elegans and mice. A splicing mediator hrpu-1 regulates a significant part of these AS events in C. elegans; knocking it down suppresses DR-mediated longevity. Concurrently, due to increased AS, NMD pathway genes are upregulated and knocking down UPF1 homologue smg-2 suppresses DR lifespan. Knockdown of NMD during DR significantly increases the inclusion of PTC-containing introns and the lengths of the 3'UTRs. Finally, we demonstrate that PHA-4/FOXA transcriptionally regulates the AS-NMD genes. Our study suggests that DR uses AS to amplify the proteome, supporting physiological remodelling required for enhanced longevity. This increases the dependence on NMD, but also helps fine-tune the expression of metabolic and splicing mediators. AS-NMD may thus provide an energetically favourable level of dynamic gene expression control during dietary restriction.Alternative splicing coupled to nonsense-mediated decay (AS-NMD) is a conserved mechanism for post-transcriptional gene regulation. Here, the authors provide evidence that AS-NMD is enhanced during dietary restriction (DR) and is required for DR-mediated longevity assurance in C. elegans.

SUBMITTER: Tabrez SS 

PROVIDER: S-EPMC5563511 | biostudies-literature | 2017 Aug

REPOSITORIES: biostudies-literature

altmetric image

Publications

Differential alternative splicing coupled to nonsense-mediated decay of mRNA ensures dietary restriction-induced longevity.

Tabrez Syed Shamsh SS   Sharma Ravi Datta RD   Jain Vaibhav V   Siddiqui Atif Ahmed AA   Mukhopadhyay Arnab A  

Nature communications 20170821 1


Alternative splicing (AS) coupled to nonsense-mediated decay (AS-NMD) is a conserved mechanism for post-transcriptional gene regulation. Here we show that, during dietary restriction (DR), AS is enhanced in Caenorhabditis elegans and mice. A splicing mediator hrpu-1 regulates a significant part of these AS events in C. elegans; knocking it down suppresses DR-mediated longevity. Concurrently, due to increased AS, NMD pathway genes are upregulated and knocking down UPF1 homologue smg-2 suppresses  ...[more]

Similar Datasets

| S-EPMC1270949 | biostudies-literature
| S-EPMC7726792 | biostudies-literature
| S-SCDT-EMBOR-2020-51369-T | biostudies-other
| S-EPMC140922 | biostudies-literature