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Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges.


ABSTRACT: Emergence of polyphagous herbivorous insects entails significant adaptation to recognize, detoxify and digest a variety of host-plants. Despite of its biological and practical importance - since insects eat 20% of crops - no exhaustive analysis of gene repertoires required for adaptations in generalist insect herbivores has previously been performed. The noctuid moth Spodoptera frugiperda ranks as one of the world's worst agricultural pests. This insect is polyphagous while the majority of other lepidopteran herbivores are specialist. It consists of two morphologically indistinguishable strains ("C" and "R") that have different host plant ranges. To describe the evolutionary mechanisms that both enable the emergence of polyphagous herbivory and lead to the shift in the host preference, we analyzed whole genome sequences from laboratory and natural populations of both strains. We observed huge expansions of genes associated with chemosensation and detoxification compared with specialist Lepidoptera. These expansions are largely due to tandem duplication, a possible adaptation mechanism enabling polyphagy. Individuals from natural C and R populations show significant genomic differentiation. We found signatures of positive selection in genes involved in chemoreception, detoxification and digestion, and copy number variation in the two latter gene families, suggesting an adaptive role for structural variation.

SUBMITTER: Gouin A 

PROVIDER: S-EPMC5613006 | biostudies-literature | 2017 Sep

REPOSITORIES: biostudies-literature

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Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges.

Gouin Anaïs A   Bretaudeau Anthony A   Nam Kiwoong K   Gimenez Sylvie S   Aury Jean-Marc JM   Duvic Bernard B   Hilliou Frédérique F   Durand Nicolas N   Montagné Nicolas N   Darboux Isabelle I   Kuwar Suyog S   Chertemps Thomas T   Siaussat David D   Bretschneider Anne A   Moné Yves Y   Ahn Seung-Joon SJ   Hänniger Sabine S   Grenet Anne-Sophie Gosselin AG   Neunemann David D   Maumus Florian F   Luyten Isabelle I   Labadie Karine K   Xu Wei W   Koutroumpa Fotini F   Escoubas Jean-Michel JM   Llopis Angel A   Maïbèche-Coisne Martine M   Salasc Fanny F   Tomar Archana A   Anderson Alisha R AR   Khan Sher Afzal SA   Dumas Pascaline P   Orsucci Marion M   Guy Julie J   Belser Caroline C   Alberti Adriana A   Noel Benjamin B   Couloux Arnaud A   Mercier Jonathan J   Nidelet Sabine S   Dubois Emeric E   Liu Nai-Yong NY   Boulogne Isabelle I   Mirabeau Olivier O   Le Goff Gaelle G   Gordon Karl K   Oakeshott John J   Consoli Fernando L FL   Volkoff Anne-Nathalie AN   Fescemyer Howard W HW   Marden James H JH   Luthe Dawn S DS   Herrero Salvador S   Heckel David G DG   Wincker Patrick P   Kergoat Gael J GJ   Amselem Joelle J   Quesneville Hadi H   Groot Astrid T AT   Jacquin-Joly Emmanuelle E   Nègre Nicolas N   Lemaitre Claire C   Legeai Fabrice F   d'Alençon Emmanuelle E   Fournier Philippe P  

Scientific reports 20170925 1


Emergence of polyphagous herbivorous insects entails significant adaptation to recognize, detoxify and digest a variety of host-plants. Despite of its biological and practical importance - since insects eat 20% of crops - no exhaustive analysis of gene repertoires required for adaptations in generalist insect herbivores has previously been performed. The noctuid moth Spodoptera frugiperda ranks as one of the world's worst agricultural pests. This insect is polyphagous while the majority of other  ...[more]

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