Transcriptome and Differential Expression Profiling Analysis of the Mechanism of Ca²⁺ Regulation in Peanut (Arachis hypogaea) Pod Development.

ABSTRACT: Calcium not only serves as a necessary nutrient for plant growth but also acts as a ubiquitous central hub in a large number of signaling pathways. Free Ca²⁺ deficiency in the soil may cause early embryo abortion, which eventually led to abnormal development of peanut pod during the harvest season. To understand the mechanisms of Ca²⁺ regulation in pod development, transcriptome analysis of peanut gynophores and pods was performed by comparing the treatments between free Ca²⁺ sufficiency and free Ca²⁺ deficiency using Illumina HiSeq™ 2000. 9,903,082,800 nt bases are generated totally. After assembly, the average length of 102,819 unigenes is 999 nt, N50 is 1,782 nt. RNA-seq based gene expression profilings showed a large number of genes at the tr

SUBMITTER: Yang S 

PROVIDER: S-EPMC5625282 | biostudies-literature | 2017

REPOSITORIES: biostudies-literature