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Draft genome sequence of Xylaria sp., the causal agent of taproot decline of soybean in the southern United States.

ABSTRACT: The draft genome of Xylaria sp. isolate MSU_SB201401, causal agent of taproot decline of soybean in the southern U.S., is presented here. The genome assembly was 56.7 Mb in size with an L50 of 246. A total of 10,880 putative protein-encoding genes were predicted, including 647 genes encoding carbohydrate-active enzymes and 1053 genes encoding secreted proteins. This is the first draft genome of a plant-pathogenic Xylaria sp. associated with soybean. The draft genome of Xylaria sp. isolate MSU_SB201401 will provide an important resource for future experiments to determine the molecular basis of pathogenesis.

SUBMITTER: Sharma S 

PROVIDER: S-EPMC5767910 | biostudies-literature | 2018 Apr

REPOSITORIES: biostudies-literature

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Draft genome sequence of <i>Xylaria</i> sp., the causal agent of taproot decline of soybean in the southern United States.

Sharma Sandeep S   Zaccaron Alex Z AZ   Ridenour John B JB   Allen Tom W TW   Conner Kassie K   Doyle Vinson P VP   Price Trey T   Sikora Edward E   Singh Raghuwinder R   Spurlock Terry T   Tomaso-Peterson Maria M   Wilkerson Tessie T   Bluhm Burton H BH  

Data in brief 20180103

The draft genome of <i>Xylaria</i> sp. isolate MSU_SB201401, causal agent of taproot decline of soybean in the southern U.S., is presented here. The genome assembly was 56.7 Mb in size with an L50 of 246. A total of 10,880 putative protein-encoding genes were predicted, including 647 genes encoding carbohydrate-active enzymes and 1053 genes encoding secreted proteins. This is the first draft genome of a plant-pathogenic <i>Xylaria</i> sp. associated with soybean. The draft genome of <i>Xylaria</  ...[more]

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