Analysis of the Complete Genome Sequence of Cucumber mosaic virus Strain K.

ABSTRACT: The complete genome sequence of Cucumber mosaic virus strain K was determined by deep RNA sequencing. The tripartite genome consists of a 3,382-nucleotide (nt) RNA1, a 3,050-nt RNA2, and a 2,218-nt RNA3 segment. Phylogenetic analysis placed RNA1 and RNA2 in subgroup IB. However, RNA3 grouped with subgroup IA isolates, indicating a likely recombination event.

SUBMITTER: Moyle R 

PROVIDER: S-EPMC5814493 | biostudies-literature | 2018 Feb

REPOSITORIES: biostudies-literature