Transcriptome analysis of pecan seeds at different developing stages and identification of key genes involved in lipid metabolism.

ABSTRACT: Pecan is an economically important nut crop tree due to its unique texture and flavor properties. The pecan seed is rich of unsaturated fatty acid and protein. However, little is known about the molecular mechanisms of the biosynthesis of fatty acids in the developing seeds. In this study, transcriptome sequencing of the developing seeds was performed using Illumina sequencing technology. Pecan seed embryos at different developmental stages were collected and sequenced. The transcriptomes of pecan seeds at two key developing stages (PA, the initial stage and PS, the fast oil accumulation stage) were also compared. A total of 82,155 unigenes, with an average length of 1,198 bp from seven independent libraries were generated. After functional annotations, we detected approximately 55,854 CDS

SUBMITTER: Xu Z 

PROVIDER: S-EPMC5919011 | biostudies-literature | 2018

REPOSITORIES: biostudies-literature