Global gene expression profiling for fruit organs and pathogen infections in the pepper, Capsicum annuum L.

ABSTRACT: Hot pepper (Capsicum annuum) is one of the most consumed vegetable crops in the world and useful to human as it has many nutritional and medicinal values. Genomic resources of pepper are publically available since the pepper genomes have been completed and massive data such as transcriptomes have been deposited. Nevertheless, global transcriptome profiling is needed to identify molecular mechanisms related to agronomic traits in pepper, but limited analyses are published. Here, we report the comprehensive analysis of pepper transcriptomes during fruit ripening and pathogen infection. For the ripening, transcriptome data were obtained from placenta and pericarp at seven developmental stages. To reveal global transcriptomic landscapes during infection, leaves at six time points post-infectio

SUBMITTER: Kim MS 

PROVIDER: S-EPMC5987667 | biostudies-literature | 2018 Jun

REPOSITORIES: biostudies-literature