Dataset of the first transcriptome assembly of the tree crop "yerba mate" (Ilex paraguariensis) and systematic characterization of protein coding genes.

ABSTRACT: This contribution contains data associated to the research article entitled "Exploring the genes of yerba mate (Ilex paraguariensis A. St.-Hil.) by NGS and de novo transcriptome assembly" (Debat et al., 2014) [1]. By means of a bioinformatic approach involving extensive NGS data analyses, we provide a resource encompassing the full transcriptome assembly of yerba mate, the first available reference for the Ilex L. genus. This dataset (Supplementary files 1 and 2) consolidates the transcriptome-wide assembled sequences of I. paraguariensis with further comprehensive annotation of the protein coding genes of yerba mate via the integration of Arabidopsis thaliana databases. The generated data is pivotal for the characterization of agronomical relevant genes

SUBMITTER: Aguilera PM 

PROVIDER: S-EPMC5988406 | biostudies-literature | 2018 Apr

REPOSITORIES: biostudies-literature