Drosophila parasitoid wasps bears a distinct DNA transposon profile.

ABSTRACT:

Background

The majority of Eukaryotic genomes are composed of a small portion of stable (non-mobile) genes and a large fraction of parasitic mobile elements such as transposable elements and endogenous viruses: the Mobilome. Such important component of many genomes are normally underscored in genomic analysis and detailed characterized mobilomes only exists for model species. In this study, we used a combination of de novo and homology approaches to characterize the Mobilome of two non-model parasitoid wasp species.

Results

The different methodologies employed for TE characterization recovered TEs with different features as TE consensus number and size. Moreover, some TEs were detected only by one or few methodologies. RepeatExplorer and dnaPipeTE estimated a low TE content

SUBMITTER: da Silva AF 

PROVIDER: S-EPMC6035795 | biostudies-literature | 2018

REPOSITORIES: biostudies-literature