NanoPack: visualizing and processing long-read sequencing data.

ABSTRACT: Summary:Here we describe NanoPack, a set of tools developed for visualization and processing of long-read sequencing data from Oxford Nanopore Technologies and Pacific Biosciences. Availability and implementation:The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code can be found at https://github.com/wdecoster/nanopack, together with links to separate scripts and their documentation. The scripts are compatible with Linux, Mac OS and the MS Windows 10 subsystem for Linux and are available as a graphical user interface, a web service at http://nanoplot.bioinf.be and command line tools. Supplementary information:Supplementary data are available at Bioinformatics online.

SUBMITTER: De Coster W 

PROVIDER: S-EPMC6061794 | biostudies-literature | 2018 Aug

REPOSITORIES: biostudies-literature