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Disrupted alternative splicing for genes implicated in splicing and ciliogenesis causes PRPF31 retinitis pigmentosa.


ABSTRACT: Mutations in pre-mRNA processing factors (PRPFs) cause autosomal-dominant retinitis pigmentosa (RP), but it is unclear why mutations in ubiquitously expressed genes cause non-syndromic retinal disease. Here, we generate transcriptome profiles from RP11 (PRPF31-mutated) patient-derived retinal organoids and retinal pigment epithelium (RPE), as well as Prpf31+/- mouse tissues, which revealed that disrupted alternative splicing occurred for specific splicing programmes. Mis-splicing of genes encoding pre-mRNA splicing proteins was limited to patient-specific retinal cells and Prpf31+/- mouse retinae and RPE. Mis-splicing of genes implicated in ciliogenesis and cellular adhesion was associated with severe RPE defects that include disrupted apical - basal polarity, reduced trans-epithelial resistance and phagocytic capacity, and decreased cilia length and incidence. Disrupted cilia morphology also occurred in patient-derived photoreceptors, associated with progressive degeneration and cellular stress. In situ gene editing of a pathogenic mutation rescued protein expression and key cellular phenotypes in RPE and photoreceptors, providing proof of concept for future therapeutic strategies.

SUBMITTER: Buskin A 

PROVIDER: S-EPMC6185938 | biostudies-literature | 2018 Oct

REPOSITORIES: biostudies-literature

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Disrupted alternative splicing for genes implicated in splicing and ciliogenesis causes PRPF31 retinitis pigmentosa.

Buskin Adriana A   Zhu Lili L   Chichagova Valeria V   Basu Basudha B   Mozaffari-Jovin Sina S   Dolan David D   Droop Alastair A   Collin Joseph J   Bronstein Revital R   Mehrotra Sudeep S   Farkas Michael M   Hilgen Gerrit G   White Kathryn K   Pan Kuan-Ting KT   Treumann Achim A   Hallam Dean D   Bialas Katarzyna K   Chung Git G   Mellough Carla C   Ding Yuchun Y   Krasnogor Natalio N   Przyborski Stefan S   Zwolinski Simon S   Al-Aama Jumana J   Alharthi Sameer S   Xu Yaobo Y   Wheway Gabrielle G   Szymanska Katarzyna K   McKibbin Martin M   Inglehearn Chris F CF   Elliott David J DJ   Lindsay Susan S   Ali Robin R RR   Steel David H DH   Armstrong Lyle L   Sernagor Evelyne E   Urlaub Henning H   Pierce Eric E   Lührmann Reinhard R   Grellscheid Sushma-Nagaraja SN   Johnson Colin A CA   Lako Majlinda M  

Nature communications 20181012 1


Mutations in pre-mRNA processing factors (PRPFs) cause autosomal-dominant retinitis pigmentosa (RP), but it is unclear why mutations in ubiquitously expressed genes cause non-syndromic retinal disease. Here, we generate transcriptome profiles from RP11 (PRPF31-mutated) patient-derived retinal organoids and retinal pigment epithelium (RPE), as well as Prpf31<sup>+/-</sup> mouse tissues, which revealed that disrupted alternative splicing occurred for specific splicing programmes. Mis-splicing of g  ...[more]

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