Phylogenetics of tick-borne encephalitis virus in endemic foci in the upper Rhine region in France and Germany.

ABSTRACT:

Objective

Tick-borne encephalitis (TBE) caused by the tick-borne encephalitis virus (TBEV) is the most important tick-borne arboviral disease in Europe and Asia. The Upper Rhine Valley is thought to be the very western border of TBEV distribution in Europe. The aim of our study was to identify natural foci and isolate TBEV from ticks, to determine the prevalence of TBEV in local tick populations and to study the phylogenetic relatedness of circulating TBEV strains in this region.

Material and methods

Ticks were collected between 2016, 2017 and 2018 by flagging. TBEV was isolated from collected ticks and phylogenetic analyses were performed. Minimal infection rates (MIR) of the collected ticks were calculated.

Results

At 12 sampling sites, a total of 4,064 Ixodes ticks

SUBMITTER: Bestehorn M 

PROVIDER: S-EPMC6193627 | biostudies-literature | 2018

REPOSITORIES: biostudies-literature