Transmembrane transport and stress response genes play an important role in adaptation of Arabidopsis halleri to metalliferous soils.

ABSTRACT: When plants adapt to local environments, strong signatures of selection are expected in the genome, particularly in high-stress environments such as trace metal element enriched (metalliferous) soils. Using Arabidopsis halleri, a model species for metal homeostasis and adaptation to extreme environments, we identifid genes, gene variants, and pathways that are associated with soil properties and may thus contribute to adaptation to high concentrations of trace metal elements. We analysed whole-genome Pool-seq data from two metallicolous (from metalliferous soils) and two non-metallicolous populations (in total 119 individuals) and associated allele frequencies of the identified single-nucleotide polymorphisms (SNPs) with soil variables measured on site. Additionally, we accounted for polyg

SUBMITTER: Sailer C 

PROVIDER: S-EPMC6208402 | biostudies-literature | 2018 Oct

REPOSITORIES: biostudies-literature