IS-CellR: a user-friendly tool for analyzing and visualizing single-cell RNA sequencing data.

ABSTRACT:

Summary

Interactive platform for single-cell RNA-sequencing (iS-CellR) is a web-based Shiny application that is designed to provide user-friendly, comprehensive analysis of single-cell RNA sequencing data. iS-CellR has the capability to run on any modern web browser and provides an accessible graphical user interface that enables the user to perform complex single-cell RNA-sequencing analysis without requiring programming skills.

Availability and implementation

iS-CellR is open source and available through GitHub at https://github.com/immcore/iS-CellR. iS-CellR is implemented in Docker and can be launched on any operating system with Docker installed.

Supplementary information

Supplementary data are available at Bioinformatics online.

SUBMITTER: Patel MV 

PROVIDER: S-EPMC6289135 | biostudies-literature | 2018 Dec

REPOSITORIES: biostudies-literature