GLUE: a flexible software system for virus sequence data.

ABSTRACT:

Background

Virus genome sequences, generated in ever-higher volumes, can provide new scientific insights and inform our responses to epidemics and outbreaks. To facilitate interpretation, such data must be organised and processed within scalable computing resources that encapsulate virology expertise. GLUE (Genes Linked by Underlying Evolution) is a data-centric bioinformatics environment for building such resources. The GLUE core data schema organises sequence data along evolutionary lines, capturing not only nucleotide data but associated items such as alignments, genotype definitions, genome annotations and motifs. Its flexible design emphasises applicability to different viruses and to diverse needs within research, clinical or public health contexts.

Results

HCV-GLUE is

SUBMITTER: Singer JB 

PROVIDER: S-EPMC6299651 | biostudies-literature | 2018 Dec

REPOSITORIES: biostudies-literature