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Transcriptome Sequencing Reveals a Complete Genome Sequence of Cowpea Aphid-Borne Mosaic Virus from Passion Fruit in Kenya.

ABSTRACT: Analysis of transcriptome sequencing (RNA-Seq) data revealed a complete Cowpea aphid-borne mosaic virus (CABMV) genome from virus-infected passion fruit in Kenya. We compared it with six complete CABMV genomes, one each from Zimbabwe and Uganda and two each from Brazil and India. The Zimbabwean isolate CABMV-Z was the closest, with 83.0% nucleotide identity.

SUBMITTER: Munguti F 

PROVIDER: S-EPMC6328679 | biostudies-literature | 2019 Jan

REPOSITORIES: biostudies-literature

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Transcriptome Sequencing Reveals a Complete Genome Sequence of <i>Cowpea Aphid-Borne Mosaic Virus</i> from Passion Fruit in Kenya.

Munguti F F   Maina S S   Nyaboga E N EN   Kilalo D D   Kimani E E   Macharia M M   Holton T T  

Microbiology resource announcements 20190110 2

Analysis of transcriptome sequencing (RNA-Seq) data revealed a complete <i>Cowpea aphid-borne mosaic virus</i> (CABMV) genome from virus-infected passion fruit in Kenya. We compared it with six complete CABMV genomes, one each from Zimbabwe and Uganda and two each from Brazil and India. The Zimbabwean isolate CABMV-Z was the closest, with 83.0% nucleotide identity. ...[more]

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