Cost-effective assembly of the African wild dog (Lycaon pictus) genome using linked reads.

ABSTRACT:

Background

A high-quality reference genome assembly is a valuable tool for the study of non-model organisms. Genomic techniques can provide important insights about past population sizes and local adaptation and can aid in the development of breeding management plans. This information is important for fields such as conservation genetics, where endangered species require critical and immediate attention. However, funding for genomic-based methods can be sparse for conservation projects, as costs for general species management can consume budgets.

Findings

Here, we report the generation of high-quality reference genomes for the African wild dog (Lycaon pictus) at a low cost (<$3000), thereby facilitating future studies of this endangered canid. We generated assemblies for thr

SUBMITTER: Armstrong EE 

PROVIDER: S-EPMC6350039 | biostudies-literature | 2019 Feb

REPOSITORIES: biostudies-literature