Dataset Information

Transcriptomic profiles of muscle, heart, and spleen in reaction to circadian heat stress in Ethiopian highland and lowland male chicken.

ABSTRACT: Temperature stress impacts both welfare and productivity of livestock. Global warming is expected to increase the impact, especially in tropical areas. We investigated the biological mechanisms regulated by temperature stress due to the circadian temperature cycle in temperature adapted and non-adapted chicken under tropical conditions. We studied transcriptome profiles of heart, breast muscle, and spleen tissues of Ethiopian lowland chicken adapted to high circadian temperatures and non-adapted Ethiopian highland chicken under lowland conditions at three points during the day: morning, noon, and evening. Functional annotations and network analyses of genes differentially expressed among the time points of the day indicate major differences in the reactions of the tissues to increasing and decreasing temperatures, and also the two chickens lines differ. However, epigenetic changes of chromatin methylation and histone (de)acetylation seemed to be central regulatory mechanisms in all tissues in both chicken lines. Finally, all tissues showed differentially expressed genes between morning and evening times indicating biological mechanisms that need to change during the night to reach morning levels again the next day.

SUBMITTER: Te Pas MFW

PROVIDER: S-EPMC6363629 | biostudies-literature | 2019 Jan

REPOSITORIES: biostudies-literature

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Transcriptomic profiles of muscle, heart, and spleen in reaction to circadian heat stress in Ethiopian highland and lowland male chicken.

Te Pas Marinus F W MFW Park Woncheoul W Srikanth Krishnamoorthy K Kemp Steve S Kim Jun-Mo JM Lim Dajeong D Park Jong-Eun JE

Cell stress & chaperones 20181218 1

Temperature stress impacts both welfare and productivity of livestock. Global warming is expected to increase the impact, especially in tropical areas. We investigated the biological mechanisms regulated by temperature stress due to the circadian temperature cycle in temperature adapted and non-adapted chicken under tropical conditions. We studied transcriptome profiles of heart, breast muscle, and spleen tissues of Ethiopian lowland chicken adapted to high circadian temperatures and non-adapted ...[more]

PMID: 30565091

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Project description:BackgroundMushrooms generate strong and contrasting feelings ranging from extreme aversion to intense liking. To categorize these attitudes, Wasson and Wasson coined the dichotomic terms “mycophilia” and “mycophobia” in 1957. In Mesoamerica these categories have been associated to ecological regions. Highland peoples are viewed as mycophiles, whereas lowland inhabitants are considered mycophobes. However, this division is based on little empirical evidence and few indicators. This study questioned whether mycophilia and mycophobia are indeed related to ecological regions through the evaluation of 19 indicators tested in the highlands and lowlands of Chiapas, Mexico.MethodsThe heterogeneity of attitudes toward mushrooms was explored in terms of ecological region and sociocultural variables. Information was obtained through structured interviews in 10 communities in Los Altos de Chiapas (highlands) and the Selva Lacandona (lowlands). We analyzed indicators separately through χ2 tests and multivariate techniques. The Mycophilia-Mycophobia Index was also used in the analysis. To assess which factors better explain the distribution of attitudes, we built 11 models using the Beta probability-density function and compared them with the Akaike Information Criterion.ResultsMost people had positive attitudes in both ecological regions. The classification and ordination analyses found two large groups comprising both highland and lowland towns. Contrary to expectation if mycophilia and mycophobia were mutually exclusive, all the fitted probability distributions were bell-shaped; indicating these attitudes behave as a continuous variable. The model best supported by data included occupation and ethnicity. Indigenous peasants had the highest degree of mycophilia.DiscussionResults suggest the studied populations tend to be mycophilic and that their attitudes are not dichotomic, but rather a gradient. Most people occupied intermediate degrees of mycophilia. Despite there markable similarity in the degree of mycophilia between ecological regions, the Principle-Coordinates Analysis shows differences in the specific way in which people from either region establishes a cultural relationship with mushrooms. The comparison of models suggests that sociocultural variables explains the differences better than ecological regions do. The obtained results are evidence of mycophilia among lowlands inhabitants in the Mayan region and of the fact that the mycophilia-mycophobia phenomenon is not expressed as a bimodal frequency distribution.

Dataset Information

Transcriptomic profiles of muscle, heart, and spleen in reaction to circadian heat stress in Ethiopian highland and lowland male chicken.

Publications

Transcriptomic profiles of muscle, heart, and spleen in reaction to circadian heat stress in Ethiopian highland and lowland male chicken.

Similar Datasets

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