Dataset Information

Photochemical "In-Air" Combinatorial Discovery of Antimicrobial Co-polymers.

ABSTRACT: There is an urgent need to identify new, non-traditional antimicrobials. The discovery of new polymeric antimicrobials is limited by current low-throughput synthetic tools, which means that limited chemical space has been explored. Herein, we employ photochemical "in-air" reversible addition-fragmentation chain-transfer (RAFT) polymerization with microwell plates, using liquid-handling robots to assemble large libraries of cationic polymers, without the need for degassing or purification steps, facilitating transfer to screening. Several lead polymers were identified including a co-polymer with propylene glycol side chains with significantly enhanced antimicrobial activity and increased therapeutic window. Mechanistic studies showed that this polymer was bacteriostatic, and surprisingly did not lyse the cell membranes, implying an alternative mode of action. This versatile method using simple robotics will help to develop new biomaterials with emergent properties.

SUBMITTER: Richards SJ

PROVIDER: S-EPMC6391955 | biostudies-literature | 2018 Sep

REPOSITORIES: biostudies-literature

ACCESS DATA

Publications

Photochemical "In-Air" Combinatorial Discovery of Antimicrobial Co-polymers.

Richards Sarah-Jane SJ Jones Adam A Tomás Ruben M F RMF Gibson Matthew I MI

Chemistry (Weinheim an der Bergstrasse, Germany) 20180820 52

There is an urgent need to identify new, non-traditional antimicrobials. The discovery of new polymeric antimicrobials is limited by current low-throughput synthetic tools, which means that limited chemical space has been explored. Herein, we employ photochemical "in-air" reversible addition-fragmentation chain-transfer (RAFT) polymerization with microwell plates, using liquid-handling robots to assemble large libraries of cationic polymers, without the need for degassing or purification steps, ...[more]

PMID: 30069965

Similar Datasets

Project description:Triclosan antimicrobial molecular fluctuating energies of nonbonding electron pairs for the oxygen atom by ether bond rotations are reviewed with conformational computational chemistry analyses. Subsequent understanding of triclosan alternating ether bond rotations is able to help explain several material properties in Polymer Science. Unique bond rotation entanglements between triclosan and the polymer chains increase both the mechanical properties of polymer toughness and strength that are enhanced even better through secondary bonding relationships. Further, polymer blend compatibilization is considered due to similar molecular relationships and polarities. With compatibilization of triclosan in polymers a more uniform stability for nonpolar triclosan in the polymer solid state is retained by the antimicrobial for extremely low release with minimum solubility into aqueous solution. As a result, triclosan is projected for long extended lifetimes as an antimicrobial polymer additive. Further, triclosan rapid alternating ether bond rotations disrupt secondary bonding between chain monomers in the resin state to reduce viscosity and enhance polymer blending. Thus, triclosan is considered for a polymer additive with multiple properties to be an antimicrobial with additional benefits as a nonpolar toughening agent and a hydrophobic wetting agent. The triclosan material relationships with alternating ether bond rotations are described through a complete different form of medium by comparisons with known antimicrobial properties that upset bacterial cell membranes through rapid fluctuating mechanomolecular energies. Also, triclosan bond entanglements with secondary bonding can produce structural defects in weak bacterial lipid membranes requiring pliability that can then interfere with cell division. Regarding applications with polymers, triclosan can be incorporated by mixing into a resin system before cure, melt mixed with thermoplastic polymers that set on cooling into a solid or alternatively applied as a coating through several different methods with dissolving into an organic solvent and dried on by evaporation as a common means.

Project description:Antimicrobial peptides (AMPs) provide protection against a variety of pathogenic bacteria and are, therefore, an important part of the innate immune system. Over the past decade, there has been considerable interest in developing AMPs as intravenously administered antibiotics. However, despite extensive efforts in the pharmaceutical and biotechnology industry, it has proven difficult to achieve this goal. While researchers have solved some relatively simple problems such as susceptibility to proteolysis, more severe problems have included the expense of the materials, toxicity, poor efficacy, and limited tissue distribution. In this Account, we describe our efforts to design and synthesize "foldamers"-- short sequence-specific oligomers based on arylamide and beta-amino acid backbones, which fold into well-defined secondary structures-- that could act as antimicrobial agents. We reasoned that small "foldamers" would be less expensive to produce than peptides, and might have better tissue distribution. It should be easier to fine-tune the structures and activities of these molecules to minimize toxicity. Because the activities of many AMPs depends primarily on their overall physicochemical properties rather than the fine details of their precise amino acid sequences, we have designed and synthesized very small "coarse-grained" molecules, which are far simpler than naturally produced AMPs. The molecular design of these foldamers epitomizes the positively charged amphiphilic structures believed to be responsible for the activity of AMPs. The designed oligomers show greater activity than the parent peptides. They have also provided leads for novel small molecule therapeutics that show excellent potency in animal models for multidrug resistant bacterial infections. In addition, such molecules can serve as relatively simple experimental systems for investigations aimed at understanding the mechanism of action for this class of antimicrobial agents. The foldamers' specificity for bacterial membranes relative to mammalian membranes appears to arise from differences in membrane composition and physical properties between these cell types. Furthermore, because experimental coarse-graining provided such outstanding results, we developed computational coarse-grained models to enable molecular dynamic simulations of these molecules with phospholipid membranes. These simulations allow investigation of larger systems for longer times than conventional molecular dynamics simulations, allowing us to investigate how physiologically relevant surface concentrations of AMP mimics affect the bilayer structure and properties. Finally, we apply the principles discovered through this work to the design of inexpensive antimicrobial polymers and materials.

Project description:Solar thermal fuel (STF) materials store energy through light-induced changes in the structures of photoactive molecular groups, and the stored energy is released as heat when the system undergoes reconversion to the ground-state structure. Solid-state STF devices could be useful for a range of applications; however, the light-induced structural changes required for energy storage are often limited or prevented by dense molecular packing in condensed phases. Recently, polymers have been proposed as effective solid-state STF platforms, as they can offer the bulk properties of solid materials while retaining the molecular-level free volume and/or mobility to enable local structural changes in photoresponsive groups. Light-induced energy storage and macroscopic heat release have been demonstrated for polymers with photoisomerizable azobenzene side groups. However, the mechanism of energy storage and the link between the polymer structure, energy density and storage duration has not yet been explored in detail. In this work, we present a systematic study of methacrylate- and acrylate-based polymers with azobenzene side groups to establish the mechanism of energy storage and release and the factors affecting energy density and reconversion kinetics. For polymers with directly attached azobenzene side groups, the energy storage properties are in line with previous work on similar systems, and the photoisomerization and reconversion properties of the azobenzene side groups mirror those of molecular azobenzene. However, the inclusion of an alkyl linker between the azobenzene side group and the backbone significantly increases the photoswitching efficiency, giving almost quantitative conversion to the Z isomeric state. The presence of the alkyl linker also reduces the glass transition temperature and leads to faster spontaneous thermal reconversion to the E isomeric form, but in all cases, half-lives of more than 4 days are observed in the solid state, which provides scope for applications requiring daily energy storage-release cycles. The maximum gravimetric energy density observed is 143 J g-1, which represents an increase of up to 44% compared to polymers with directly attached azobenzene moieties.

Dataset Information

Photochemical "In-Air" Combinatorial Discovery of Antimicrobial Co-polymers.

Publications

Photochemical "In-Air" Combinatorial Discovery of Antimicrobial Co-polymers.

Similar Datasets

OmicsDI is part of the ELIXIR infrastructure

Tweets