An update to database TraVA: organ-specific cold stress response in Arabidopsis thaliana.

ABSTRACT:

Background

Transcriptome map is a powerful tool for a variety of biological studies; transcriptome maps that include different organs, tissues, cells and stages of development are currently available for at least 30 plants. Some of them include samples treated by environmental or biotic stresses. However, most studies explore only limited set of organs and developmental stages (leaves or seedlings). In order to provide broader view of organ-specific strategies of cold stress response we studied expression changes that follow exposure to cold (+ 4 °C) in different aerial parts of plant: cotyledons, hypocotyl, leaves, young flowers, mature flowers and seeds using RNA-seq.

Results

The results on differential expression in leaves are congruent with current knowledge on stress re

SUBMITTER: Klepikova AV 

PROVIDER: S-EPMC6393959 | biostudies-literature | 2019 Feb

REPOSITORIES: biostudies-literature