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Early lineage specification defines alveolar epithelial ontogeny in the murine lung.


ABSTRACT: During the stepwise specification and differentiation of tissue-specific multipotent progenitors, lineage-specific transcriptional networks are activated or repressed to orchestrate cell specification. The gas-exchange niche in the lung contains two major epithelial cell types, alveolar type 1 (AT1) and AT2 cells, and the timing of lineage specification of these cells is critical for the correct formation of this niche and postnatal survival. Integrating cell-specific lineage tracing studies, spatially specific mRNA transcript and protein expression, and single-cell RNA-sequencing analysis, we demonstrate that specification of alveolar epithelial cell fate begins concomitantly with the proximal-distal specification of epithelial progenitors and branching morphogenesis earlier than previously appreciated. By using a newly developed dual-lineage tracing system, we show that bipotent alveolar cells that give rise to AT1 and AT2 cells are a minor contributor to the alveolar epithelial population. Furthermore, single-cell assessment of the transcriptome identifies specified AT1 and AT2 progenitors rather than bipotent cells during sacculation. These data reveal a paradigm of organ formation whereby lineage specification occurs during the nascent stages of development coincident with broad tissue-patterning processes, including axial patterning of the endoderm and branching morphogenesis.

SUBMITTER: Frank DB 

PROVIDER: S-EPMC6410851 | biostudies-literature | 2019 Mar

REPOSITORIES: biostudies-literature

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Early lineage specification defines alveolar epithelial ontogeny in the murine lung.

Frank David B DB   Penkala Ian J IJ   Zepp Jarod A JA   Sivakumar Aravind A   Linares-Saldana Ricardo R   Zacharias William J WJ   Stolz Katharine G KG   Pankin Josh J   Lu MinQi M   Wang Qiaohong Q   Babu Apoorva A   Li Li L   Zhou Su S   Morley Michael P MP   Jain Rajan R   Morrisey Edward E EE  

Proceedings of the National Academy of Sciences of the United States of America 20190219 10


During the stepwise specification and differentiation of tissue-specific multipotent progenitors, lineage-specific transcriptional networks are activated or repressed to orchestrate cell specification. The gas-exchange niche in the lung contains two major epithelial cell types, alveolar type 1 (AT1) and AT2 cells, and the timing of lineage specification of these cells is critical for the correct formation of this niche and postnatal survival. Integrating cell-specific lineage tracing studies, sp  ...[more]

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