CoGe LoadExp+: A web-based suite that integrates next-generation sequencing data analysis workflows and visualization.

ABSTRACT: To make genomic and epigenomic analyses more widely available to the biological research community, we have created LoadExp+, a suite of bioinformatics workflows integrated with the web-based comparative genomics platform, CoGe. LoadExp+ allows users to perform transcriptomic (RNA-seq), epigenomic (bisulfite-seq), chromatin-binding (ChIP-seq), variant identification (SNPs), and population genetics analyses against any genome in CoGe, including genomes integrated by users themselves. Through LoadExp+'s integration with CoGe's existing features, all analyses are available for visualization and additional downstream processing, and are available for export to CyVerse's data management and analysis platforms. LoadExp+ provides easy-to-use functionality to manage genomics and epigenomics data t

SUBMITTER: Grover JW 

PROVIDER: S-EPMC6508507 | biostudies-literature | 2017 Jul

REPOSITORIES: biostudies-literature