Unknown

Dataset Information

0

Gain of 20q11.21 in Human Pluripotent Stem Cells Impairs TGF-?-Dependent Neuroectodermal Commitment.


ABSTRACT: Gain of 20q11.21 is one of the most common recurrent genomic aberrations in human pluripotent stem cells. Although it is known that overexpression of the antiapoptotic gene Bcl-xL confers a survival advantage to the abnormal cells, their differentiation capacity has not been fully investigated. RNA sequencing of mutant and control hESC lines, and a line transgenically overexpressing Bcl-xL, shows that overexpression of Bcl-xL is sufficient to cause most transcriptional changes induced by the gain of 20q11.21. Moreover, the differentially expressed genes in mutant and Bcl-xL overexpressing lines are enriched for genes involved in TGF-?- and SMAD-mediated signaling, and neuron differentiation. Finally, we show that this altered signaling has a dramatic negative effect on neuroectodermal differentiation, while the cells maintain their ability to differentiate to mesendoderm derivatives. These findings stress the importance of thorough genetic testing of the lines before their use in research or the clinic.

SUBMITTER: Markouli C 

PROVIDER: S-EPMC6627003 | biostudies-literature | 2019 Jul

REPOSITORIES: biostudies-literature

altmetric image

Publications

Gain of 20q11.21 in Human Pluripotent Stem Cells Impairs TGF-β-Dependent Neuroectodermal Commitment.

Markouli C C   Couvreu De Deckersberg E E   Regin M M   Nguyen H T HT   Zambelli F F   Keller A A   Dziedzicka D D   De Kock J J   Tilleman L L   Van Nieuwerburgh F F   Franceschini L L   Sermon K K   Geens M M   Spits C C  

Stem cell reports 20190606 1


Gain of 20q11.21 is one of the most common recurrent genomic aberrations in human pluripotent stem cells. Although it is known that overexpression of the antiapoptotic gene Bcl-xL confers a survival advantage to the abnormal cells, their differentiation capacity has not been fully investigated. RNA sequencing of mutant and control hESC lines, and a line transgenically overexpressing Bcl-xL, shows that overexpression of Bcl-xL is sufficient to cause most transcriptional changes induced by the gai  ...[more]

Similar Datasets

2019-06-12 | GSE116372 | GEO
| PRJNA478325 | ENA
| S-EPMC5451190 | biostudies-literature
| S-EPMC5090224 | biostudies-literature
| S-EPMC5663351 | biostudies-literature