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Visualizing probabilistic models and data with Intensive Principal Component Analysis.


ABSTRACT: Unsupervised learning makes manifest the underlying structure of data without curated training and specific problem definitions. However, the inference of relationships between data points is frustrated by the "curse of dimensionality" in high dimensions. Inspired by replica theory from statistical mechanics, we consider replicas of the system to tune the dimensionality and take the limit as the number of replicas goes to zero. The result is intensive embedding, which not only is isometric (preserving local distances) but also allows global structure to be more transparently visualized. We develop the Intensive Principal Component Analysis (InPCA) and demonstrate clear improvements in visualizations of the Ising model of magnetic spins, a neural network, and the dark energy cold dark matter ([Formula: see text]) model as applied to the cosmic microwave background.

SUBMITTER: Quinn KN 

PROVIDER: S-EPMC6628833 | biostudies-literature | 2019 Jul

REPOSITORIES: biostudies-literature

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Visualizing probabilistic models and data with Intensive Principal Component Analysis.

Quinn Katherine N KN   Clement Colin B CB   De Bernardis Francesco F   Niemack Michael D MD   Sethna James P JP  

Proceedings of the National Academy of Sciences of the United States of America 20190624 28


Unsupervised learning makes manifest the underlying structure of data without curated training and specific problem definitions. However, the inference of relationships between data points is frustrated by the "curse of dimensionality" in high dimensions. Inspired by replica theory from statistical mechanics, we consider replicas of the system to tune the dimensionality and take the limit as the number of replicas goes to zero. The result is intensive embedding, which not only is isometric (pres  ...[more]

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