Ordino: a visual cancer analysis tool for ranking and exploring genes, cell lines and tissue samples.

ABSTRACT:

Summary

Ordino is a web-based analysis tool for cancer genomics that allows users to flexibly rank, filter and explore genes, cell lines and tissue samples based on pre-loaded data, including The Cancer Genome Atlas, the Cancer Cell Line Encyclopedia and manually uploaded information. Interactive tabular data visualization that facilitates the user-driven prioritization process forms a core component of Ordino. Detail views of selected items complement the exploration. Findings can be stored, shared and reproduced via the integrated session management.

Availability and implementation

Ordino is publicly available at https://ordino.caleydoapp.org. The source code is released at https://github.com/Caleydo/ordino under the Mozilla Public License 2.0.

Supplementary information

SUBMITTER: Streit M 

PROVIDER: S-EPMC6736116 | biostudies-literature | 2019 Sep

REPOSITORIES: biostudies-literature