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Development of microsatellite markers for the Japanese endemic conifer Thuja standishii and transfer to other East Asian species.


ABSTRACT: OBJECTIVE:Design polymorphic microsatellite loci that will be useful for studies of the genetic diversity, gene-flow and reproduction in the Japanese endemic conifer Thuja standishii and test the transferability of these loci to the two other East Asian species, T. sutchuenensis and T. koraiensis. RESULTS:Fifteen loci were developed which displayed 3 to 21 alleles per locus (average?=?9.2) among 97 samples from three populations of T. standishii. Observed heterozygosity for all samples varied between 0.33 and 0.75 (average = 0.54) while expected heterozygosity values were higher with an average over the 15 loci of 0.62 (0.37-0.91). Low multi-locus probability of identity values (

SUBMITTER: Worth JRP 

PROVIDER: S-EPMC6814961 | biostudies-literature | 2019 Oct

REPOSITORIES: biostudies-literature

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Development of microsatellite markers for the Japanese endemic conifer Thuja standishii and transfer to other East Asian species.

Worth James R P JRP   Chang K S KS   Ha Y-H YH   Qin Aili A  

BMC research notes 20191025 1


<h4>Objective</h4>Design polymorphic microsatellite loci that will be useful for studies of the genetic diversity, gene-flow and reproduction in the Japanese endemic conifer Thuja standishii and test the transferability of these loci to the two other East Asian species, T. sutchuenensis and T. koraiensis.<h4>Results</h4>Fifteen loci were developed which displayed 3 to 21 alleles per locus (average = 9.2) among 97 samples from three populations of T. standishii. Observed heterozygosity for all sa  ...[more]

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