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Crystal structure, Hirshfeld surface analysis and PIXEL calculations of a 1:1 epimeric mixture of 3-[(4-nitro-benzyl-idene)amino]-2(R,S)-(4-nitro-phenyl)-5(S)-(propan-2-yl)imidazolidin-4-one.


ABSTRACT: A 1:1 epimeric mixture of 3-[(4-nitro-benzyl-idene)amino]-2(R,S)-(4-nitro-phen-yl)-5(S)-(propan-2-yl)imidazolidin-4-one, C19H19N5O5, was isolated from a reaction mixture of 2(S)-amino-3-methyl-1-oxo-butane-hydrazine and 4-nitro-benz-alde-hyde in ethanol. The product was derived from an initial reaction of 2(S)-amino-3-methyl-1-oxo-butane-hydrazine at its hydrazine group to provide a 4-nitro-benzyl-idene derivative, followed by a cyclization reaction with another mol-ecule of 4-nitro-benzaldehyde to form the chiral five-membered imidazolidin-4-one ring. The formation of the five-membered imidazolidin-4-one ring occurred with retention of the configuration at the 5-position, but with racemization at the 2-position. In the crystal, N-H⋯O(nitro) hydrogen bonds, weak C-H⋯O(carbon-yl) and C-H⋯O(nitro) hydrogen bonds, as well as C-H⋯π, N-H⋯π and π-π inter-actions, are present. These combine to generate a three-dimensional array. Hirshfeld surface analysis and PIXEL calculations are also reported.

SUBMITTER: Gomes LR 

PROVIDER: S-EPMC6829720 | biostudies-literature | 2019 Nov

REPOSITORIES: biostudies-literature

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Crystal structure, Hirshfeld surface analysis and PIXEL calculations of a 1:1 epimeric mixture of 3-[(4-nitro-benzyl-idene)amino]-2(<i>R,S</i>)-(4-nitro-phenyl)-5(<i>S</i>)-(propan-2-yl)imidazolidin-4-one.

Gomes Ligia R LR   Low John Nicolson JN   Wardell James L JL   de Souza Marcus V N MVN   da Costa Cristiane F CF  

Acta crystallographica. Section E, Crystallographic communications 20191029 Pt 11


A 1:1 epimeric mixture of 3-[(4-nitro-benzyl-idene)amino]-2(<i>R,S</i>)-(4-nitro-phen-yl)-5(<i>S</i>)-(propan-2-yl)imidazolidin-4-one, C<sub>19</sub>H<sub>19</sub>N<sub>5</sub>O<sub>5</sub>, was isolated from a reaction mixture of 2(<i>S</i>)-amino-3-methyl-1-oxo-butane-hydrazine and 4-nitro-benz-alde-hyde in ethanol. The product was derived from an initial reaction of 2(<i>S</i>)-amino-3-methyl-1-oxo-butane-hydrazine at its hydrazine group to provide a 4-nitro-benzyl-idene derivative, followed  ...[more]

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