MoMI-G: modular multi-scale integrated genome graph browser.

ABSTRACT:

Background

Genome graph is an emerging approach for representing structural variants on genomes with branches. For example, representing structural variants of cancer genomes as a genome graph is more natural than representing such genomes as differences from the linear reference genome. While more and more structural variants are being identified by long-read sequencing, many of them are difficult to visualize using existing structural variants visualization tools. To this end, visualization method for large genome graphs such as human cancer genome graphs is demanded.

Results

We developed MOdular Multi-scale Integrated Genome graph browser, MoMI-G, a web-based genome graph browser that can visualize genome graphs with structural variants and supporting evidences such as re

SUBMITTER: Yokoyama TT 

PROVIDER: S-EPMC6833150 | biostudies-literature | 2019 Nov

REPOSITORIES: biostudies-literature