Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft Genome Sequences of Two Pseudomonas Strains That Are Able To Use Furan Derivatives as Their Sole Carbon Source.

ABSTRACT: Pseudomonas sp. strains ALS1279 and ALS1131 were isolated from wastewater treatment facilities on the basis of their ability to use furfural, a key lignocellulose-derived inhibitor, as their only carbon source. Here, we present the draft genome sequences of both strains, which can shed light on catabolic pathways for furan compounds in pseudomonads.

SUBMITTER: Farkas C

PROVIDER: S-EPMC6952648 | biostudies-literature | 2020 Jan

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Draft Genome Sequences of Two Pseudomonas Strains That Are Able To Use Furan Derivatives as Their Sole Carbon Source.

Farkas Carlos C Donoso Raúl A RA Gárate-Castro Carla C Villegas Pamela P Durán Roberto E RE Seeger Michael M Pérez-Pantoja Danilo D

Microbiology resource announcements 20200109 2

Pseudomonas sp. strains ALS1279 and ALS1131 were isolated from wastewater treatment facilities on the basis of their ability to use furfural, a key lignocellulose-derived inhibitor, as their only carbon source. Here, we present the draft genome sequences of both strains, which can shed light on catabolic pathways for furan compounds in pseudomonads. ...[more]

PMID: 31919162

Similar Datasets

Genome Sequences of Two Pseudomonas Isolates That Can Use Metformin as the Sole Nitrogen Source.

Project description:Metformin is a major water pollutant globally. We report the complete genome sequences of two pseudomonads, Pseudomonas sp. strain KHPS1 and Pseudomonas hydrolytica strain KHPS2, isolated from wastewater treatment plant sludge, which can grow on metformin as the nitrogen source. Both isolates contained ~80-kb plasmids that may contain metformin breakdown genes.

| S-EPMC9476953 | biostudies-literature

Draft Genome Sequences of Two Xanthomonas fragariae Strains.

Project description:Xanthomonas fragariae is the causal agent of angular leaf spot of strawberry. Short-read sequences were generated for two X. fragariae strains with different virulence phenotypes on the Illumina HiSeq 2000 platform. These genome sequences will contribute to a better understanding of pathogen evolution and the genes contributing to virulence in X. fragariae.

| S-EPMC8063642 | biostudies-literature

Complete and Draft Genome Sequences of Eight Oceanic Pseudomonas aeruginosa Strains.

Project description:Pseudomonas aeruginosa is one of the most common model bacterial species, and genomes of hundreds of strains of this species have been sequenced to date. However, currently there is only one available genome of an oceanic isolate. Here, we report two complete and six draft genome sequences of P. aeruginosa isolates from the open ocean.

| S-EPMC5668555 | biostudies-literature

Draft Genome Sequences of Two Bulgarian Bacillus anthracis Strains.

Project description:Bacillus anthracis strains previously isolated from Bulgaria form a unique subcluster within the A1.a cluster that is typical for isolates from southeastern Europe. Here, we report the draft genome sequences of two Bulgarian B. anthracis strains belonging to the A branch (A.Br.)008/009 canonical single nucleotide polymorphism (SNP) group of the major A branch.

| S-EPMC3630405 | biostudies-literature

Aspergillus nidulans strains TNO2a3, ∆snfA and ∆schA grown on avicel as sole carbon source

Project description:Transcriptome of A. nidulans TNO2a3, ∆snfA and ∆schA strains when grown on complete media (CM) and transferred to minimal media plus avicel as a sole carbon source for 8 and 24 hours.

2013-07-16 | GSE47810 | GEO

Two draft genome sequences of Pseudomonas jessenii strains isolated from a copper contaminated site in Denmark.

Project description:Pseudomonas jessenii C2 and Pseudomonas jessenii H16 were isolated from low-Cu and high-Cu industrially contaminated soil, respectively. P. jessenii H16 displayed significant resistance to copper when compared to P. jessenii C2. Here we describe genome sequences and interesting features of these two strains. The genome of P. jessenii C2 comprised 6,420,113 bp, with 5814 protein-coding genes and 67 RNA genes. P. jessenii H16 comprised 6,807,788 bp, with 5995 protein-coding genes and 70 RNA genes. Of special interest was a specific adaptation to this harsh copper-contaminated environment as P. jessenii H16 contained a novel putative copper resistance genomic island (GI) of around 50,000 bp.

| S-EPMC5100093 | biostudies-literature

Draft Genome Sequences of Pseudomonas sp. Strains Isolated from Wheat in Germany.

Project description:Three chloramphenicol-resistant Pseudomonas sp. strains were isolated from wheat grain in Germany on rose Bengal agar. The draft genome sizes ranged from 5,924,931 to 6,124,470 bp. All the isolates possessed genes for efflux pumps that might be responsible for an intrinsic chloramphenicol resistance. No acquired antibiotic resistance genes in these strains could be determined.

| S-EPMC6509520 | biostudies-literature

Draft Genome Sequences of Hazelnut-Associated Pseudomonas Strains Isolated in Ontario, Canada.

Project description:Two Pseudomonas strains (H346-M and H346-S) were isolated from hazelnut trees showing symptoms of shoot dieback and necrosis. The draft genome sequences of H346-M and H346-S consist of 66 and 51 contigs, respectively, with total sizes of 5,693,988 and 5,889,925 bp and 4,885 and 5,045 protein-coding sequences, respectively.

| S-EPMC7645666 | biostudies-literature

Draft Genome Sequences of Two South African Bacillus anthracis Strains.

Project description:Bacillus anthracis is a Gram-positive bacterium that causes anthrax, mainly in herbivores through exotoxins and capsule produced on plasmids, pXO1 and pXO2. This paper compares the whole-genome sequences of two B. anthracis strains from an endemic region and a sporadic outbreak in South Africa. Sequencing was done using next-generation sequencing technologies.

| S-EPMC4653780 | biostudies-literature

Draft Genome Sequences of Four Pseudomonas aeruginosa Clinical Strains with Various Biofilm Phenotypes.

Project description:Biofilms produced by Pseudomonas aeruginosa present a serious threat to cystic fibrosis patients. Here, we report the draft genome sequences of four cystic fibrosis isolates displaying various mucoid and biofilm phenotypes. The estimated average genome size was about 6,255,986 ± 50,202 bp with a mean G+C content of 66.52 ± 0.06%.

| S-EPMC6940292 | biostudies-literature