Whole-genome sequencing of wild Siberian musk deer (Moschus moschiferus) provides insights into its genetic features.

ABSTRACT:

Background

Siberian musk deer, one of the seven species, is distributed in coniferous forests of Asia. Worldwide, the population size of Siberian musk deer is threatened by severe illegal poaching for commercially valuable musk and meat, habitat losses, and forest fire. At present, this species is categorized as Vulnerable on the IUCN Red List. However, the genetic information of Siberian musk deer is largely unexplored.

Results

Here, we produced 3.10 Gb draft assembly of wild Siberian musk deer with a contig N50 of 29,145 bp and a scaffold N50 of 7,955,248 bp. We annotated 19,363 protein-coding genes and estimated 44.44% of the genome to be repetitive. Our phylogenetic analysis reveals that wild Siberian musk deer is closer to Bovidae than to Cervidae. Comparative analyses

SUBMITTER: Yi L 

PROVIDER: S-EPMC6995116 | biostudies-literature | 2020 Jan

REPOSITORIES: biostudies-literature