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The complex genetic landscape of familial MDS and AML reveals pathogenic germline variants.


ABSTRACT: The inclusion of familial myeloid malignancies as a separate disease entity in the revised WHO classification has renewed efforts to improve the recognition and management of this group of at risk individuals. Here we report a cohort of 86 acute myeloid leukemia (AML) and myelodysplastic syndrome (MDS) families with 49 harboring germline variants in 16 previously defined loci (57%). Whole exome sequencing in a further 37 uncharacterized families (43%) allowed us to rationalize 65 new candidate loci, including genes mutated in rare hematological syndromes (ADA, GP6, IL17RA, PRF1 and SEC23B), reported in prior MDS/AML or inherited bone marrow failure series (DNAH9, NAPRT1 and SH2B3) or variants at novel loci (DHX34) that appear specific to inherited forms of myeloid malignancies. Altogether, our series of MDS/AML families offer novel insights into the etiology of myeloid malignancies and provide a framework to prioritize variants for inclusion into routine diagnostics and patient management.

SUBMITTER: Rio-Machin A 

PROVIDER: S-EPMC7042299 | biostudies-literature | 2020 Feb

REPOSITORIES: biostudies-literature

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The complex genetic landscape of familial MDS and AML reveals pathogenic germline variants.

Rio-Machin Ana A   Vulliamy Tom T   Hug Nele N   Walne Amanda A   Tawana Kiran K   Cardoso Shirleny S   Ellison Alicia A   Pontikos Nikolas N   Wang Jun J   Tummala Hemanth H   Al Seraihi Ahad Fahad H AFH   Alnajar Jenna J   Bewicke-Copley Findlay F   Armes Hannah H   Barnett Michael M   Bloor Adrian A   Bödör Csaba C   Bowen David D   Fenaux Pierre P   Green Andrew A   Hallahan Andrew A   Hjorth-Hansen Henrik H   Hossain Upal U   Killick Sally S   Lawson Sarah S   Layton Mark M   Male Alison M AM   Marsh Judith J   Mehta Priyanka P   Mous Rogier R   Nomdedéu Josep F JF   Owen Carolyn C   Pavlu Jiri J   Payne Elspeth M EM   Protheroe Rachel E RE   Preudhomme Claude C   Pujol-Moix Nuria N   Renneville Aline A   Russell Nigel N   Saggar Anand A   Sciuccati Gabriela G   Taussig David D   Toze Cynthia L CL   Uyttebroeck Anne A   Vandenberghe Peter P   Schlegelberger Brigitte B   Ripperger Tim T   Steinemann Doris D   Wu John J   Mason Joanne J   Page Paula P   Akiki Susanna S   Reay Kim K   Cavenagh Jamie D JD   Plagnol Vincent V   Caceres Javier F JF   Fitzgibbon Jude J   Dokal Inderjeet I  

Nature communications 20200225 1


The inclusion of familial myeloid malignancies as a separate disease entity in the revised WHO classification has renewed efforts to improve the recognition and management of this group of at risk individuals. Here we report a cohort of 86 acute myeloid leukemia (AML) and myelodysplastic syndrome (MDS) families with 49 harboring germline variants in 16 previously defined loci (57%). Whole exome sequencing in a further 37 uncharacterized families (43%) allowed us to rationalize 65 new candidate l  ...[more]

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