Generalized lattice graphs for 2D-visualization of biological information.

ABSTRACT: Several graph representations have been introduced for different data in theoretical biology. For instance, complex networks based on Graph theory are used to represent the structure and/or dynamics of different large biological systems such as protein-protein interaction networks. In addition, Randic, Liao, Nandy, Basak, and many others developed some special types of graph-based representations. This special type of graph includes geometrical constrains to node positioning in space and adopts final geometrical shapes that resemble lattice-like patterns. Lattice networks have been used to visually depict DNA and protein sequences but they are very flexible. However, despite the proved efficacy of new lattice-like graph/networks to represent diverse systems, most works focus on only one sp

SUBMITTER: Gonzalez-Diaz H 

PROVIDER: S-EPMC7094121 | biostudies-literature | 2009 Nov

REPOSITORIES: biostudies-literature