CRISPRi-based radiation modifier screen identifies long non-coding RNA therapeutic targets in glioma.

ABSTRACT:

Background

Long non-coding RNAs (lncRNAs) exhibit highly cell type-specific expression and function, making this class of transcript attractive for targeted cancer therapy. However, the vast majority of lncRNAs have not been tested as potential therapeutic targets, particularly in the context of currently used cancer treatments. Malignant glioma is rapidly fatal, and ionizing radiation is part of the current standard-of-care used to slow tumor growth in both adult and pediatric patients.

Results

We use CRISPR interference (CRISPRi) to screen 5689 lncRNA loci in human glioblastoma (GBM) cells, identifying 467 hits that modify cell growth in the presence of clinically relevant doses of fractionated radiation. Thirty-three of these lncRNA hits sensitize cells to radiation, and

SUBMITTER: Liu SJ 

PROVIDER: S-EPMC7110660 | biostudies-literature | 2020 Mar

REPOSITORIES: biostudies-literature