ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates.

ABSTRACT: ANISEED (https://www.aniseed.cnrs.fr) is the main model organism database for the worldwide community of scientists working on tunicates, the vertebrate sister-group. Information provided for each species includes functionally-annotated gene and transcript models with orthology relationships within tunicates, and with echinoderms, cephalochordates and vertebrates. Beyond genes the system describes other genetic elements, including repeated elements and cis-regulatory modules. Gene expression profiles for several thousand genes are formalized in both wild-type and experimentally-manipulated conditions, using formal anatomical ontologies. These data can be explored through three complementary types of browsers, each offering a different view-point. A developmental browser summarizes the info

SUBMITTER: Dardaillon J 

PROVIDER: S-EPMC7145539 | biostudies-literature | 2020 Jan

REPOSITORIES: biostudies-literature