Mouse Phenome Database: a data repository and analysis suite for curated primary mouse phenotype data.

ABSTRACT: The Mouse Phenome Database (MPD; https://phenome.jax.org) is a widely accessed and highly functional data repository housing primary phenotype data for the laboratory mouse accessible via APIs and providing tools to analyze and visualize those data. Data come from investigators around the world and represent a broad scope of phenotyping endpoints and disease-related traits in naïve mice and those exposed to drugs, environmental agents or other treatments. MPD houses rigorously curated per-animal data with detailed protocols. Public ontologies and controlled vocabularies are used for annotation. In addition to phenotype tools, genetic analysis tools enable users to integrate and interpret genome-phenome relations across the database. Strain types and populations include inbred, recombinant

SUBMITTER: Bogue MA 

PROVIDER: S-EPMC7145612 | biostudies-literature | 2020 Jan

REPOSITORIES: biostudies-literature