Proline: an efficient and user-friendly software suite for large-scale proteomics.

ABSTRACT: MOTIVATION:The proteomics field requires the production and publication of reliable mass spectrometry-based identification and quantification results. Although many tools or algorithms exist, very few consider the importance of combining, in a unique software environment, efficient processing algorithms and a data management system to process and curate hundreds of datasets associated with a single proteomics study. RESULTS:Here, we present Proline, a robust software suite for analysis of MS-based proteomics data, which collects, processes and allows visualization and publication of proteomics datasets. We illustrate its ease of use for various steps in the validation and quantification workflow, its data curation capabilities and its computational efficiency. The DDA label-free quantifica

SUBMITTER: Bouyssie D 

PROVIDER: S-EPMC7214047 | biostudies-literature | 2020 May

REPOSITORIES: biostudies-literature