MCSM-membrane: predicting the effects of mutations on transmembrane proteins.

ABSTRACT: Significant efforts have been invested into understanding and predicting the molecular consequences of mutations in protein coding regions, however nearly all approaches have been developed using globular, soluble proteins. These methods have been shown to poorly translate to studying the effects of mutations in membrane proteins. To fill this gap, here we report, mCSM-membrane, a user-friendly web server that can be used to analyse the impacts of mutations on membrane protein stability and the likelihood of them being disease associated. mCSM-membrane derives from our well-established mutation modelling approach that uses graph-based signatures to model protein geometry and physicochemical properties for supervised learning. Our stability predictor achieved correlations of up to 0.72 and

SUBMITTER: Pires DEV 

PROVIDER: S-EPMC7319563 | biostudies-literature | 2020 Jul

REPOSITORIES: biostudies-literature