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A Peroxodiiron(III/III) Intermediate Mediating Both N-Hydroxylation Steps in Biosynthesis of the N-Nitrosourea Pharmacophore of Streptozotocin by the Multi-domain Metalloenzyme SznF.


ABSTRACT: The alkylating warhead of the pancreatic cancer drug streptozotocin (SZN) contains an N-nitrosourea moiety constructed from Nω-methyl-l-arginine (l-NMA) by the multi-domain metalloenzyme SznF. The enzyme's central heme-oxygenase-like (HO-like) domain sequentially hydroxylates Nδ and Nω' of l-NMA. Its C-terminal cupin domain then rearranges the triply modified arginine to Nδ-hydroxy-Nω-methyl-Nω-nitroso-l-citrulline, the proposed donor of the functional pharmacophore. Here we show that the HO-like domain of SznF can bind Fe(II) and use it to capture O2, forming a peroxo-Fe2(III/III) intermediate. This intermediate has absorption- and Mössbauer-spectroscopic features similar to those of complexes previously trapped in ferritin-like diiron oxidases and oxygenases (FDOs) and, more recently, the HO-like fatty acid oxidase UndA. The SznF peroxo-Fe2(III/III) complex is an intermediate in both hydroxylation steps, as shown by the concentration-dependent acceleration of its decay upon exposure to either l-NMA or Nδ-hydroxy-Nω-methyl-l-Arg (l-HMA). The Fe2(III/III) cluster produced upon decay of the intermediate has a small Mössbauer quadrupole splitting parameter, implying that, unlike the corresponding product states of many FDOs, it lacks an oxo-bridge. The subsequent decomposition of the product cluster to one or more paramagnetic Fe(III) species over several hours explains why SznF was previously purified and crystallographically characterized without its cofactor. Programmed instability of the oxidized form of the cofactor appears to be a unifying characteristic of the emerging superfamily of HO-like diiron oxidases and oxygenases (HDOs).

SUBMITTER: McBride MJ 

PROVIDER: S-EPMC7359745 | biostudies-literature | 2020 Jul

REPOSITORIES: biostudies-literature

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A Peroxodiiron(III/III) Intermediate Mediating Both <i>N</i>-Hydroxylation Steps in Biosynthesis of the <i>N</i>-Nitrosourea Pharmacophore of Streptozotocin by the Multi-domain Metalloenzyme SznF.

McBride Molly J MJ   Sil Debangsu D   Ng Tai L TL   Crooke Anne Marie AM   Kenney Grace E GE   Tysoe Christina R CR   Zhang Bo B   Balskus Emily P EP   Boal Amie K AK   Krebs Carsten C   Bollinger J Martin JM  

Journal of the American Chemical Society 20200624 27


The alkylating warhead of the pancreatic cancer drug streptozotocin (SZN) contains an <i>N</i>-nitrosourea moiety constructed from <i>N</i><sup>ω</sup>-methyl-l-arginine (l-NMA) by the multi-domain metalloenzyme SznF. The enzyme's central heme-oxygenase-like (HO-like) domain sequentially hydroxylates N<sup>δ</sup> and N<sup>ω</sup>' of l-NMA. Its C-terminal cupin domain then rearranges the triply modified arginine to <i>N</i><sup>δ</sup>-hydroxy<i>-N</i><sup>ω</sup>-methyl-<i>N</i><sup>ω</sup>-n  ...[more]

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