Ontology highlight
ABSTRACT:
SUBMITTER: Fida M
PROVIDER: S-EPMC7422488 | biostudies-literature | 2020 May
REPOSITORIES: biostudies-literature
Fida Madiha M Cunningham Scott A SA Murphy Matthew P MP Bonomo Robert A RA Hujer Kristine M KM Hujer Andrea M AM Kreiswirth Barry N BN Chia Nicholas N Jeraldo Patricio R PR Nelson Heidi H Zinsmaster Nicole M NM Toraskar Nikhil N Chang Weizhong W Patel Robin R
Diagnostic microbiology and infectious disease 20200121 1
Whole genome sequencing (WGS) is replacing traditional microbiological typing methods for investigation of outbreaks in clinical settings. Here, we used a clinical microbiology laboratory core genome multilocus sequence typing (cgMLST) workflow to analyze 40 isolates of K. pneumoniae which are part of the Antimicrobial Resistance Leadership Group (ARLG) isolate collection, alongside 10 Mayo Clinic K. pneumoniae isolates, comparing results to those of pulsed-field gel electrophoresis (PFGE). Addi ...[more]