Dataset Information

Whole genome sequencing data of a clinical Enterococcus gallinarum strain EGR748 from Sabah, Malaysia.

ABSTRACT: Enterococcus gallinarum is a gram positive facultatively anaerobic bacteria that is typically found in mammalian intestinal tracts. It is generally not considered pathogenic to humans and is rarely reported. Here, we present the draft genome sequence data of Enterococcus gallinarum strain EGR748 isolated from a human clinical sample, and sequenced using the Illumina HiSeq 4000 system. The estimated whole genome size of the strain was 3,730,000?bp with a G?+?C content of 40.43%. The de novo assembly of the genome generated 55 contigs with an N50 of 208,509?bp. In addition, the Maximum Likelihood phylogenetic analysis based on the 16S rRNA sequence data accurately clustered EGR748 with other E. gallinarum strains. The data may be useful to demonstrate the capacity of this enterococcal species becoming the causal agents of nosocomial blood-stream infections. The genome dataset has been deposited at DDBJ/ENA/GenBank under the accession number JAABOR000000000.

SUBMITTER: Mastor NN

PROVIDER: S-EPMC7569291 | biostudies-literature | 2020 Dec

REPOSITORIES: biostudies-literature

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Whole genome sequencing data of a clinical Enterococcus gallinarum strain EGR748 from Sabah, Malaysia.

Mastor Nur Nashyiroh NN Subbiah Vijay Kumar VK Bakar Wan Nazirah Wan Abu WNWA Begum Khurshida K Alam M Jahangir MJ Hoque Mohammad Zahirul MZ

Data in brief 20201002

Enterococcus gallinarum is a gram positive facultatively anaerobic bacteria that is typically found in mammalian intestinal tracts. It is generally not considered pathogenic to humans and is rarely reported. Here, we present the draft genome sequence data of Enterococcus gallinarum strain EGR748 isolated from a human clinical sample, and sequenced using the Illumina HiSeq 4000 system. The estimated whole genome size of the strain was 3,730,000 bp with a G + C content ...[more]

PMID: 33102652

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Dataset Information

Whole genome sequencing data of a clinical Enterococcus gallinarum strain EGR748 from Sabah, Malaysia.

Publications

Whole genome sequencing data of a clinical <i>Enterococcus gallinarum</i> strain EGR748 from Sabah, Malaysia.

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