Cross Attention Transformers for Multi-modal Unsupervised Whole-Body PET Anomaly Detection.

ABSTRACT: Cancers can have highly heterogeneous uptake patterns best visualised in positron emission tomography. These patterns are essential to detect, diagnose, stage and predict the evolution of cancer. Due to this heterogeneity, a general-purpose cancer detection model can be built using unsupervised learning anomaly detection models; these models learn a healthy representation of tissue and detect cancer by predicting deviations from healthy appearances. This task alone requires models capable of accurately learning long-range interactions between organs, imaging patterns, and other abstract features with high levels of expressivity. Such characteristics are suitably satisfied by transformers, and have been shown to generate state-of-the-art results in unsupervised anomaly detection by training on healthy data. This work expands upon such approaches by introducing multi-modal conditioning of the transformer via cross-attention, i.e. supplying anatomical reference information from paired CT images to aid the PET anomaly detection task. Using 83 whole-body PET/CT samples containing various cancer types, we show that our anomaly detection method is robust and capable of achieving accurate cancer localisation results even in cases where healthy training data is unavailable. Furthermore, the proposed model uncertainty, in conjunction with a kernel density estimation approach, is shown to provide a statistically robust alternative to residual-based anomaly maps. Overall, a superior performance is demonstrated against leading alternatives, drawing attention to the potential of these approaches.

SUBMITTER: Patel A 

PROVIDER: S-EPMC7616582 | biostudies-literature | 2022

REPOSITORIES: biostudies-literature