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Update: proposed reference sequences for subtypes of hepatitis E virus (species Orthohepevirus A).

ABSTRACT: In this recommendation, we update our 2016 table of reference sequences of subtypes of hepatitis E virus (HEV; species Orthohepevirus A, family Hepeviridae) for which complete genome sequences are available (Smith et al., 2016). This takes into account subsequent publications describing novel viruses and additional proposals for subtype names; there are now eight genotypes and 36 subtypes. Although it remains difficult to define strict criteria for distinguishing between virus subtypes, and is not within the remit of the International Committee on Taxonomy of Viruses (ICTV), the use of agreed reference sequences will bring clarity and stability to researchers, epidemiologists and clinicians working with HEV.

SUBMITTER: Smith DB

PROVIDER: S-EPMC7660235 | biostudies-literature | 2020 Jul

REPOSITORIES: biostudies-literature

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Update: proposed reference sequences for subtypes of hepatitis E virus (species Orthohepevirus A).

Smith Donald B DB Izopet Jacques J Nicot Florence F Simmonds Peter P Jameel Shahid S Meng Xiang-Jin XJ Norder Heléne H Okamoto Hiroaki H van der Poel Wim H M WHM Reuter Gábor G Purdy Michael A MA

The Journal of general virology 20200701 7

In this recommendation, we update our 2016 table of reference sequences of subtypes of hepatitis E virus (HEV; species Orthohepevirus A, family Hepeviridae) for which complete genome sequences are available (Smith et al., 2016). This takes into account subsequent publications describing novel viruses and additional proposals for subtype names; there are now eight genotypes and 36 subtypes. Although it remains difficult to define strict criteria for distinguishing between vir ...[more]

PMID: 32469300

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