Unknown

Dataset Information

0

Complete mitochondrial genome sequence of lettuce pathogenic fungus, Fusarium oxysporum f. sp. lactucae 16-086.

ABSTRACT: Fusarium oxysporum f. sp. lactucae 016-086 is a plant pathogenic filamentous fungus isolated from wilted lettuce in Korea. We reported complete mitochondrial genome sequence of F. oxysporum f. sp. lactucae 016-086. Total length of this mitogenome is 41,826?bp and it encoded 42 genes (14 protein-coding genes, 2 rRNAs, and 26 tRNAs). Nucleotide sequence of coding region takes over 30.6%, and overall GC content is 32.5%. Phylogenetic tree of Fusarium mitochondrial genomes presented distinct clades along with nine formae speciales. This mitogenome will contribute distinguishing formae speciales of F. oxysoporum claearly with additional mitogenomes sequenced in the near future.

SUBMITTER: Kwon W 

PROVIDER: S-EPMC7706590 | biostudies-literature | 2019 Sep

REPOSITORIES: biostudies-literature

Json Xml
altmetric image

Publications

Complete mitochondrial genome sequence of lettuce pathogenic fungus, <i>Fusarium oxysporum</i> f. sp. <i>lactucae</i> 16-086.

Kwon Woochan W   Park Jongsun J   Kim Jung-Bun JB   Park Mi-Jeong MJ   Kim Tae-Sung TS  

Mitochondrial DNA. Part B, Resources 20190925 2

<i>Fusarium oxysporum</i> f. sp. <i>lactucae</i> 016-086 is a plant pathogenic filamentous fungus isolated from wilted lettuce in Korea. We reported complete mitochondrial genome sequence of <i>F. oxysporum</i> f. sp. <i>lactucae</i> 016-086. Total length of this mitogenome is 41,826 bp and it encoded 42 genes (14 protein-coding genes, 2 rRNAs, and 26 tRNAs). Nucleotide sequence of coding region takes over 30.6%, and overall GC content is 32.5%. Phylogenetic tree of <i>Fusarium</i> mitochondrial  ...[more]

Similar Datasets

Unknown Complete mitochondrial genome sequence of lettuce pathogenic fungus, <i>Fusarium oxysporum</i> f. sp. <i>lactucae</i> 09-002.
| S-EPMC7706453 | biostudies-literature
Genomics microRNA-like RNAs exploring and expression profile in plant pathogenic fungus Fusarium oxysporum f. sp. niveum
2016-07-15 | GSE84384 | GEO
Transcriptomics microRNA-like RNAs exploring and expression profile in plant pathogenic fungus Fusarium oxysporum f. sp. niveum
2016-07-15 | E-GEOD-84384 | biostudies-arrayexpress
Unknown MicroRNA-like RNAs in plant pathogenic fungus Fusarium oxysporum f. sp. niveum are involved in toxin gene expression fine tuning.
| S-EPMC5617829 | biostudies-literature
Unknown The distribution and host range of the banana Fusarium wilt fungus, Fusarium oxysporum f. sp. cubense, in Asia.
| S-EPMC5515439 | biostudies-literature
Unknown Complete mitogenome of the high ethanol production fungus <i>Fusarium oxysporum</i> Mh2-2.
| S-EPMC7799908 | biostudies-literature
Genomics Fusarium oxysporum f. sp. lactucae
| PRJNA506531 | ENA
Unknown REN1 is required for development of microconidia and macroconidia, but not of chlamydospores, in the plant pathogenic fungus Fusarium oxysporum.
| S-EPMC1470687 | biostudies-other
Unknown The rhizosphere microbial community in a multiple parallel mineralization system suppresses the pathogenic fungus Fusarium oxysporum.
| S-EPMC3892345 | biostudies-literature
Unknown Foret1, a reverse transcriptase-like sequence in the filamentous fungus Fusarium oxysporum.
| S-EPMC334069 | biostudies-other