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Complete chloroplast sequence of common groundsel (Senecio vulgaris Subsp. vulgaris).

ABSTRACT: Senecio vulgaris is an exotic annual winter weed that is problematic in garlic and onion fields in Republic of Korea. The chloroplast DNA was 150,765?bp with 82,907?bp of large single-copy region, 18,214?bp of small single-copy region, and 24,822?bp of a pair of inverted repeats. A total of 104 genes were annotated including 80 protein-coding genes, 20 tRNA genes, and 4 rRNA genes. Twelve genes (ClpP, ndhB, ycf3, rpl2, rps12, trnA, trnI, trnR, trnG, trnL, and trnV) were multiple-copy genes. Senecio vulgaris was closely related to Jacobaea vulgaris in same subfamily resulting from phylogenetic analysis.

SUBMITTER: Kim JW 

PROVIDER: S-EPMC7707645 | biostudies-literature | 2019 Nov

REPOSITORIES: biostudies-literature

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Complete chloroplast sequence of common groundsel (<i>Senecio vulgaris</i> Subsp. <i>vulgaris</i>).

Kim Jin-Won JW   Lee In-Yong IY  

Mitochondrial DNA. Part B, Resources 20191108 2

<i>Senecio vulgaris</i> is an exotic annual winter weed that is problematic in garlic and onion fields in Republic of Korea. The chloroplast DNA was 150,765 bp with 82,907 bp of large single-copy region, 18,214 bp of small single-copy region, and 24,822 bp of a pair of inverted repeats. A total of 104 genes were annotated including 80 protein-coding genes, 20 tRNA genes, and 4 rRNA genes. Twelve genes (<i>ClpP</i>, <i>ndh</i>B, <i>ycf</i>3, <i>rpl</i>2, <i>rps</i>12, <i>trnA</i>, <i>trnI</i>, <i  ...[more]

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