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The complete chloroplast genome sequence of Altingia yunnanensis.

ABSTRACT: The first complete chloroplast genome (cpDNA) sequence of Altingia yunnanensis was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 160,860 bp in length, contains a large single-copy region (LSC) of 89,162 bp and a small single-copy region (SSC) of 19,008 bp, which were separated by a pair of inverted repeat (IR) regions of 26,325 bp each. The genome contains 130 genes, including 85 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. Further, the phylogenomic analysis showed that A. yunnanensis and Altingia excelsa clustered in a clade in Saxifragales order.

SUBMITTER: Qiu Q

PROVIDER: S-EPMC7748700 | biostudies-literature | 2020 Feb

REPOSITORIES: biostudies-literature

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The complete chloroplast genome sequence of Altingia yunnanensis.

Qiu Qiong Q Yang Dejun D Xu Linhong L Xu Yumei Y Wang Yi Y

Mitochondrial DNA. Part B, Resources 20200203 1

The first complete chloroplast genome (cpDNA) sequence of Altingia yunnanensis was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 160,860 bp in length, contains a large single-copy region (LSC) of 89,162 bp and a small single-copy region (SSC) of 19,008 bp, which were separated by a pair of inverted repeat (IR) regions of 26,325 bp each. The genome contains 130 genes, including 85 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. ...[more]

PMID: 33366869

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