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The complete chloroplast genome of Actinidia rubus (Actinidiaceae).

ABSTRACT: A complete chloroplast genome of Actinidia rubus, an endemic shrub in China, was sequenced and identified. The length of genome is 156,573 bp, and the GC content is 37.3%. This genome contains a large single copy (LSC; 88,473 bp) region, a small single copy (SSC; 20,492) region, a pair of inverted repeat (IR; 23,804) regions. A total of 113 unique genes were identified, including 78 protein-coding genes, 31 tRNA genes and 4 rRNA genes. The phylogenetic analysis based on complete chloroplast genome of 10 species showed that Actintdia eriantha was sister to A. rubus.

SUBMITTER: Xu YS

PROVIDER: S-EPMC7748799 | biostudies-literature | 2020 Jan

REPOSITORIES: biostudies-literature

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The complete chloroplast genome of Actinidia rubus (Actinidiaceae).

Xu Yu-Sheng YS Zhang Cheng-Gui CG Chen Jun-Tong JT Li Li-Juan LJ Liao Chuan-Jiang CJ Lv Zhen-Yu ZY Jiang Zhi-Lin ZL

Mitochondrial DNA. Part B, Resources 20200107 1

A complete chloroplast genome of Actinidia rubus, an endemic shrub in China, was sequenced and identified. The length of genome is 156,573 bp, and the GC content is 37.3%. This genome contains a large single copy (LSC; 88,473 bp) region, a small single copy (SSC; 20,492) region, a pair of inverted repeat (IR; 23,804) regions. A total of 113 unique genes were identified, including 78 protein-coding genes, 31 tRNA genes and 4 rRNA genes. The phylogenetic analysis based on complete chloropla ...[more]

PMID: 33366559

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