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The complete chloroplast genome sequence H olmskioldia sanguinea retz., an ornamental plant of Lamiaceae.

ABSTRACT: Holmskioldia sanguinea Retz. (Lamiaceae) is a widely cultivated ornamental plant. As a first report in the genus, we present the complete chloroplast genome sequence of H. sanguinea using genome skimming of paired-end NGS data. The total genome size measures 153,273 bp in length containing four subregions: 84,693 bp of large single-copy region, 17,330 bp small single-copy region, and a pair of inverted repeat regions, measuring 25,625 bp. The genome contains 115 genes including 80 protein-coding genes, 4 rRNAs, and 31 tRNAs. Phylogenetic analysis showed that H. sanguinea is a sister to Scutellaria in the subfamily Scutellarioideae of Lamiaceae.

SUBMITTER: Lee Y

PROVIDER: S-EPMC7748846 | biostudies-literature | 2020 Jan

REPOSITORIES: biostudies-literature

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The complete chloroplast genome sequence H olmskioldia sanguinea retz., an ornamental plant of Lamiaceae.

Lee Yoonkyung Y Kim Sangtae S

Mitochondrial DNA. Part B, Resources 20200127 1

Holmskioldia sanguinea Retz. (Lamiaceae) is a widely cultivated ornamental plant. As a first report in the genus, we present the complete chloroplast genome sequence of H. sanguinea using genome skimming of paired-end NGS data. The total genome size measures 153,273 bp in length containing four subregions: 84,693 bp of large single-copy region, 17,330 bp small single-copy region, and a pair of inverted repeat regions, measuring 25,625 bp. The genome contains 115 genes including 80 ...[more]

PMID: 33366801

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