GreenPhylDB v5: a comparative pangenomic database for plant genomes.

ABSTRACT: Comparative genomics is the analysis of genomic relationships among different species and serves as a significant base for evolutionary and functional genomic studies. GreenPhylDB (https://www.greenphyl.org) is a database designed to facilitate the exploration of gene families and homologous relationships among plant genomes, including staple crops critically important for global food security. GreenPhylDB is available since 2007, after the release of the Arabidopsis thaliana and Oryza sativa genomes and has undergone multiple releases. With the number of plant genomes currently available, it becomes challenging to select a single reference for comparative genomics studies but there is still a lack of databases taking advantage several genomes by species for orthology detection. GreenPhylD

SUBMITTER: Valentin G 

PROVIDER: S-EPMC7779052 | biostudies-literature | 2021 Jan

REPOSITORIES: biostudies-literature