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Characterization of the complete chloroplast genome of Yuanjiang wild Ichang papeda (Citrus cavaleriei) in China.

ABSTRACT: Ichang papeda (Citrus cavaleriei) is an endemic perennial plant in China. In this study, we assembled and annotated the complete chloroplast genome of Yuanjiang wild Ichang papeda using Illumina Hiseq-2500 sequencing data. The chloroplast genome is constituted of 160,996 bp, containing a 87,634 bp large single-copy region, a 18,762 bp small single-copy region, and a pair of 27,300 bp inverted repeat regions. The chloroplast genome contains 114 unique genes, including 80 protein-coding genes, 30 tRNAs and 4 rRNAs. Phylogenetic analysis showed that the relationship between the chloroplast gennomes of C. cavaleriei and C. reticulata is the closest, which consistently support their chloroplast relationships.

SUBMITTER: Zhang ZH

PROVIDER: S-EPMC7781987 | biostudies-literature | 2020 Sep

REPOSITORIES: biostudies-literature

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Characterization of the complete chloroplast genome of Yuanjiang wild Ichang papeda (Citrus cavaleriei) in China.

Zhang Zi-Hao ZH Long Chun-Rui CR Jiang Yan Y Yang Shi-Zao SZ Zhao Jun J Wang Shao-Hua SH

Mitochondrial DNA. Part B, Resources 20200916 3

Ichang papeda (Citrus cavaleriei) is an endemic perennial plant in China. In this study, we assembled and annotated the complete chloroplast genome of Yuanjiang wild Ichang papeda using Illumina Hiseq-2500 sequencing data. The chloroplast genome is constituted of 160,996 bp, containing a 87,634 bp large single-copy region, a 18,762 bp small single-copy region, and a pair of 27,300 bp inverted repeat regions. The chloroplast genome contains 114 unique genes, including 80 protein-coding gen ...[more]

PMID: 33458165

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