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The complete chloroplast genome of Epimedium pudingense (Berberidaceae), a narrowly distributed plant species in China.

ABSTRACT: Epimedium L. is the largest herbaceous genus of Berberidaceae which comprises more than 60 species. Epimedium pudingense is a rare plant species only narrowly inhabited in the Puding County in the Guizhou Province of China. Here, we first report the complete chloroplast genome of E. pudingense assembled from Illumina short-read sequencing data. The chloroplast genome of E. pudingense was 157,325 bp in length, with a total GC content of 36.11%. A total of 112 unique genes were identified, among which are 78 protein-coding genes, 30 tRNA genes and four rRNA genes. The phylogenetic analysis revealed that E. pudingense closely related to E. elachyphyllum. Our study will provide useful fundamental data for further phylogenetic and evolutionary studies of the Epimedium genus.

SUBMITTER: Zhang Y

PROVIDER: S-EPMC7782884 | biostudies-literature | 2020 Jul

REPOSITORIES: biostudies-literature

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The complete chloroplast genome of Epimedium pudingense (Berberidaceae), a narrowly distributed plant species in China.

Zhang Yixin Y Liu Xiang X Yao Yu Y Luo Yanjiao Y Yang Qianru Q Zhang Cheng C Chaoqun Xu X Suo Fengmei F Shen Guoan G Guo Baolin B

Mitochondrial DNA. Part B, Resources 20200702 3

Epimedium L. is the largest herbaceous genus of Berberidaceae which comprises more than 60 species. Epimedium pudingense is a rare plant species only narrowly inhabited in the Puding County in the Guizhou Province of China. Here, we first report the complete chloroplast genome of E. pudingense assembled from Illumina short-read sequencing data. The chloroplast genome of E. pudingense was 157,325 bp in length, with a total GC content of 36.11%. A total of 112 unique ge ...[more]

PMID: 33457886

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